Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
CC(C)CON=C(C(=O)NC1C(=O)N2C(C(=O)O)=CCS[C@H]12)c1csc(N)n1
InChiKey
KBJBTSQABNHGIP-SBXXRYSUSA-N
Route Content Hash
b6501981995b3f421024a84b9961f495ea631d96d5c44b1ef379d1503ec27e33
Route Signature
79a84f00a23d3fc2cb35939574af76dcd75936ae92204069417de1c100ce2a92
Synthesis route with 8 steps (convergent)
Scroll to zoom. Drag to pan. Nodes marked in green are in stock.
Route tree structure (JSON format)
{
"route": {
"id": "cmisc040200133oddreujsx73",
"signature": "79a84f00a23d3fc2cb35939574af76dcd75936ae92204069417de1c100ce2a92",
"contentHash": "b6501981995b3f421024a84b9961f495ea631d96d5c44b1ef379d1503ec27e33",
"length": 8,
"isConvergent": true
},
"target": {
"id": "cmisc040100123odd4ade47b9",
"benchmarkSetId": "cmisc03z600003oddt8xnrkvq",
"targetId": "n5-00006",
"moleculeId": "tcgde7nz2dco5k2xwu4wryr5",
"routeLength": 8,
"isConvergent": true,
"metadata": "{}",
"molecule": {
"id": "tcgde7nz2dco5k2xwu4wryr5",
"inchikey": "KBJBTSQABNHGIP-SBXXRYSUSA-N",
"smiles": "CC(C)CON=C(C(=O)NC1C(=O)N2C(C(=O)O)=CCS[C@H]12)c1csc(N)n1"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 1
},
"rootNode": {
"id": "cmisc040400143oddzidqxlzh",
"routeId": "cmisc040200133oddreujsx73",
"moleculeId": "tcgde7nz2dco5k2xwu4wryr5",
"parentId": null,
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US04841062;;194568\",\"rsmi\":\"O=C[NH:27][c:26]1[s:25][cH:24][c:23]([C:7](=[N:6][O:5][CH2:4][CH:2]([CH3:1])[CH3:3])[C:8](=[O:9])[NH:10][CH:11]2[C:12](=[O:13])[N:14]3[C:15]([C:16](=[O:17])[OH:18])=[CH:19][CH2:20][S:21][C@H:22]23)[n:28]1>CO.Cl>[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[NH:10][CH:11]1[C:12](=[O:13])[N:14]2[C:15]([C:16](=[O:17])[OH:18])=[CH:19][CH2:20][S:21][C@H:22]12)[c:23]1[cH:24][s:25][c:26]([NH2:27])[n:28]1\"}",
"molecule": {
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"inchikey": "KBJBTSQABNHGIP-SBXXRYSUSA-N",
"smiles": "CC(C)CON=C(C(=O)NC1C(=O)N2C(C(=O)O)=CCS[C@H]12)c1csc(N)n1"
},
"children": [
{
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"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US04841062;;194567\",\"rsmi\":\"O=[N+]([O-])c1ccc(C[O:18][C:16]([C:15]2=[CH:19][CH2:20][S:21][C@@H:22]3[CH:11]([NH:10][C:8]([C:7](=[N:6][O:5][CH2:4][CH:2]([CH3:1])[CH3:3])[c:23]4[cH:24][s:25][c:26]([NH:27][CH:28]=[O:29])[n:30]4)=[O:9])[C:12](=[O:13])[N:14]23)=[O:17])cc1>C.C1CCOC1.CC(=O)O.CO.O.[Pd]>[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[NH:10][CH:11]1[C:12](=[O:13])[N:14]2[C:15]([C:16](=[O:17])[OH:18])=[CH:19][CH2:20][S:21][C@H:22]12)[c:23]1[cH:24][s:25][c:26]([NH:27][CH:28]=[O:29])[n:30]1\"}",
"molecule": {
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"smiles": "CC(C)CON=C(C(=O)NC1C(=O)N2C(C(=O)O)=CCS[C@H]12)c1csc(NC=O)n1"
},
"children": [
{
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"metadata": "{\"ID\":\"US04841062;;194566\",\"rsmi\":\"O[C:8]([C:7](=[N:6][O:5][CH2:4][CH:2]([CH3:1])[CH3:3])[c:33]1[cH:34][s:35][c:36]([NH:37][CH:38]=[O:39])[n:40]1)=[O:9].[NH2:10][CH:11]1[C:12](=[O:13])[N:14]2[C:15]([C:16](=[O:17])[O:18][CH2:19][c:20]3[cH:21][cH:22][c:23]([N+:24](=[O:25])[O-:26])[cH:27][cH:28]3)=[CH:29][CH2:30][S:31][C@H:32]12>C1CCOC1.CC(C)=O.CN(C)C=O.O.O=P(Cl)(Cl)Cl>[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[NH:10][CH:11]1[C:12](=[O:13])[N:14]2[C:15]([C:16](=[O:17])[O:18][CH2:19][c:20]3[cH:21][cH:22][c:23]([N+:24](=[O:25])[O-:26])[cH:27][cH:28]3)=[CH:29][CH2:30][S:31][C@H:32]12)[c:33]1[cH:34][s:35][c:36]([NH:37][CH:38]=[O:39])[n:40]1\"}",
"molecule": {
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"inchikey": "UWKKCFFECKNVTD-AVKWCDSFSA-N",
"smiles": "CC(C)CON=C(C(=O)NC1C(=O)N2C(C(=O)OCc3ccc([N+](=O)[O-])cc3)=CCS[C@H]12)c1csc(NC=O)n1"
},
"children": [
{
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"parentId": "cmisc040400163oddjagyveh7",
"isLeaf": false,
"reactionHash": null,
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"metadata": "{\"ID\":\"US04841062;;194497\",\"rsmi\":\"O[CH:16]=[O:17].[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[OH:10])[c:11]1[cH:12][s:13][c:14]([NH2:15])[n:18]1>CC(=O)OC(C)=O>[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[OH:10])[c:11]1[cH:12][s:13][c:14]([NH:15][CH:16]=[O:17])[n:18]1\"}",
"molecule": {
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"inchikey": "JLXNDAIQKDEBFW-UHFFFAOYSA-N",
"smiles": "CC(C)CON=C(C(=O)O)c1csc(NC=O)n1"
},
"children": [
{
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"parentId": "cmisc040500173oddrcdu4jgu",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US04841062;;194496\",\"rsmi\":\"CC[O:10][C:8]([C:7](=[N:6][O:5][CH2:4][CH:2]([CH3:1])[CH3:3])[c:11]1[cH:12][s:13][c:14]([NH2:15])[n:16]1)=[O:9]>C1CCOC1.CO.[Na+].O>[CH3:1][CH:2]([CH3:3])[CH2:4][O:5][N:6]=[C:7]([C:8](=[O:9])[OH:10])[c:11]1[cH:12][s:13][c:14]([NH2:15])[n:16]1\"}",
"molecule": {
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"inchikey": "JPTAGANPEAENGI-UHFFFAOYSA-N",
"smiles": "CC(C)CON=C(C(=O)O)c1csc(N)n1"
},
"children": [
{
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"metadata": "{\"ID\":\"US04841062;;194495\",\"rsmi\":\"O=[C:13]([C:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])=[N:7][O:8][CH2:9][CH:10]([CH3:11])[CH3:12])[CH2:14]Cl.[S:15]=[C:16]([NH2:17])[NH2:18]>CCO.O>[CH3:1][CH2:2][O:3][C:4](=[O:5])[C:6](=[N:7][O:8][CH2:9][CH:10]([CH3:11])[CH3:12])[c:13]1[cH:14][s:15][c:16]([NH2:17])[n:18]1\"}",
"molecule": {
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"inchikey": "FPMTWGVYYTUCDK-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C(=NOCC(C)C)c1csc(N)n1"
},
"children": [
{
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"metadata": "{\"ID\":\"US04841062;;194494\",\"rsmi\":\"O=S(=O)(Cl)[Cl:16].[CH3:1][CH2:2][O:3][C:4](=[O:5])[C:6](=[N:7][O:8][CH2:9][CH:10]([CH3:11])[CH3:12])[C:13](=[O:14])[CH3:15]>CC(=O)O>[CH3:1][CH2:2][O:3][C:4](=[O:5])[C:6](=[N:7][O:8][CH2:9][CH:10]([CH3:11])[CH3:12])[C:13](=[O:14])[CH2:15][Cl:16]\"}",
"molecule": {
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"inchikey": "OTCCCOMISIFTHS-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C(=NOCC(C)C)C(=O)CCl"
},
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{
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"metadata": "{\"ID\":\"US04841062;;194493\",\"rsmi\":\"Br[CH2:9][CH:10]([CH3:11])[CH3:12].[CH3:1][CH2:2][O:3][C:4](=[O:5])[C:6](=[N:7][OH:8])[C:13]([CH3:14])=[O:15]>CN(C)C=O.O=C(O)O.[K+].[K+]>[CH3:1][CH2:2][O:3][C:4](=[O:5])[C:6](=[N:7][O:8][CH2:9][CH:10]([CH3:11])[CH3:12])[C:13]([CH3:14])=[O:15]\"}",
"molecule": {
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{
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{
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"molecule": {
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"smiles": "O=S(=O)(Cl)Cl"
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{
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"molecule": {
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{
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"molecule": {
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{
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"metadata": "{\"ID\":\"US04841062;;194535\",\"rsmi\":\"O=C(Cc1ccccc1)[NH:1][CH:2]1[C:3](=[O:4])[N:5]2[C:6]([C:7](=[O:8])[O:9][CH2:10][c:11]3[cH:12][cH:13][c:14]([N+:15](=[O:16])[O-:17])[cH:18][cH:19]3)=[CH:20][CH2:21][S:22][C@H:23]12>CO.ClCCl.ClP(Cl)(Cl)(Cl)Cl.c1ccncc1>[NH2:1][CH:2]1[C:3](=[O:4])[N:5]2[C:6]([C:7](=[O:8])[O:9][CH2:10][c:11]3[cH:12][cH:13][c:14]([N+:15](=[O:16])[O-:17])[cH:18][cH:19]3)=[CH:20][CH2:21][S:22][C@H:23]12\"}",
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}
}