Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
C[C@@](CCn1cc(F)c(-c2ccc(OC[C@H]3CC[C@H](OC4CCCCO4)CC3)cc2)cc1=O)(C(=O)O)S(C)(=O)=O
InChiKey
UQTTWFZHDFYXRV-NXWNVOEXSA-N
Route Content Hash
0c41ee4d00a510b8943db2cdbfbe79d230e13c80754beb6dfd2f784aafa116cc
Route Signature
9ad59cb2b3e779ed0610111fe6c342dcb8fcedc003503670e4aa64ca33f6f2f4
Synthesis route with 4 steps (convergent)
Scroll to zoom. Drag to pan. Nodes marked in green are in stock.
Route tree structure (JSON format)
{
"route": {
"id": "cmisc080c01rf5idd7txiimnr",
"signature": "9ad59cb2b3e779ed0610111fe6c342dcb8fcedc003503670e4aa64ca33f6f2f4",
"contentHash": "0c41ee4d00a510b8943db2cdbfbe79d230e13c80754beb6dfd2f784aafa116cc",
"length": 4,
"isConvergent": true
},
"target": {
"id": "cmisc080c01re5iddeq4jdrfw",
"benchmarkSetId": "cmisc07hg00005iddmvjgxdau",
"targetId": "n5-01404",
"moleculeId": "c8qq7j901m6lk0r9d5ltvzrb",
"routeLength": 4,
"isConvergent": true,
"metadata": "{}",
"molecule": {
"id": "c8qq7j901m6lk0r9d5ltvzrb",
"inchikey": "UQTTWFZHDFYXRV-NXWNVOEXSA-N",
"smiles": "C[C@@](CCn1cc(F)c(-c2ccc(OC[C@H]3CC[C@H](OC4CCCCO4)CC3)cc2)cc1=O)(C(=O)O)S(C)(=O)=O"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 1
},
"rootNode": {
"id": "cmisc080d01rg5idd9hj2ild1",
"routeId": "cmisc080c01rf5idd7txiimnr",
"moleculeId": "c8qq7j901m6lk0r9d5ltvzrb",
"parentId": null,
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20120232083A1;0278;1269900\",\"rsmi\":\"CC[O:36][C:34]([C@@:2]([CH3:1])([CH2:3][CH2:4][n:5]1[cH:6][c:7]([F:8])[c:9](-[c:10]2[cH:11][cH:12][c:13]([O:14][CH2:15][C@H:16]3[CH2:17][CH2:18][C@H:19]([O:20][CH:21]4[CH2:22][CH2:23][CH2:24][CH2:25][O:26]4)[CH2:27][CH2:28]3)[cH:29][cH:30]2)[cH:31][c:32]1=[O:33])[S:37]([CH3:38])(=[O:39])=[O:40])=[O:35]>CCO.Cl.[Li+].O>[CH3:1][C@@:2]([CH2:3][CH2:4][n:5]1[cH:6][c:7]([F:8])[c:9](-[c:10]2[cH:11][cH:12][c:13]([O:14][CH2:15][C@H:16]3[CH2:17][CH2:18][C@H:19]([O:20][CH:21]4[CH2:22][CH2:23][CH2:24][CH2:25][O:26]4)[CH2:27][CH2:28]3)[cH:29][cH:30]2)[cH:31][c:32]1=[O:33])([C:34](=[O:35])[OH:36])[S:37]([CH3:38])(=[O:39])=[O:40]\"}",
"molecule": {
"id": "c8qq7j901m6lk0r9d5ltvzrb",
"inchikey": "UQTTWFZHDFYXRV-NXWNVOEXSA-N",
"smiles": "C[C@@](CCn1cc(F)c(-c2ccc(OC[C@H]3CC[C@H](OC4CCCCO4)CC3)cc2)cc1=O)(C(=O)O)S(C)(=O)=O"
},
"children": [
{
"id": "cmisc080d01rh5iddvljcqvld",
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"moleculeId": "skmjkiqpndpudcx8cvgqrltm",
"parentId": "cmisc080d01rg5idd9hj2ild1",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20120232083A1;0277;1269899\",\"rsmi\":\"CC1(C)OB([c:15]2[cH:16][cH:17][c:18]([O:19][CH2:20][C@H:21]3[CH2:22][CH2:23][C@H:24]([O:25][CH:26]4[CH2:27][CH2:28][CH2:29][CH2:30][O:31]4)[CH2:32][CH2:33]3)[cH:34][cH:35]2)OC1(C)C.I[c:14]1[c:12]([F:13])[cH:11][n:10]([CH2:9][CH2:8][C@@:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])([CH3:7])[S:39]([CH3:40])(=[O:41])=[O:42])[c:37](=[O:38])[cH:36]1>CC1CCCO1.Cl[Pd]Cl.O.O.O=P(O)(O)O.[Fe+2].[K+].[K+].[K+]>[CH3:1][CH2:2][O:3][C:4](=[O:5])[C@@:6]([CH3:7])([CH2:8][CH2:9][n:10]1[cH:11][c:12]([F:13])[c:14](-[c:15]2[cH:16][cH:17][c:18]([O:19][CH2:20][C@H:21]3[CH2:22][CH2:23][C@H:24]([O:25][CH:26]4[CH2:27][CH2:28][CH2:29][CH2:30][O:31]4)[CH2:32][CH2:33]3)[cH:34][cH:35]2)[cH:36][c:37]1=[O:38])[S:39]([CH3:40])(=[O:41])=[O:42]\"}",
"molecule": {
"id": "skmjkiqpndpudcx8cvgqrltm",
"inchikey": "HRPMUNZTLAAQLK-HGYJUNBGSA-N",
"smiles": "CCOC(=O)[C@@](C)(CCn1cc(F)c(-c2ccc(OC[C@H]3CC[C@H](OC4CCCCO4)CC3)cc2)cc1=O)S(C)(=O)=O"
},
"children": [
{
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"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20120232083A1;0276;1269898\",\"rsmi\":\"O[c:9]1[cH:8][cH:7][c:6]([B:5]2[O:4][C:2]([CH3:1])([CH3:3])[C:28]([CH3:29])([CH3:30])[O:27]2)[cH:26][cH:25]1.[OH:10][CH2:11][C@H:12]1[CH2:13][CH2:14][C@H:15]([O:16][CH:17]2[CH2:18][CH2:19][CH2:20][CH2:21][O:22]2)[CH2:23][CH2:24]1>C1CCOC1.CC(C)OC(=O)N=NC(=O)OC(C)C.CCN(CC)CC.O.c1ccc(P(c2ccccc2)c2ccccc2)cc1>[CH3:1][C:2]1([CH3:3])[O:4][B:5]([c:6]2[cH:7][cH:8][c:9]([O:10][CH2:11][C@H:12]3[CH2:13][CH2:14][C@H:15]([O:16][CH:17]4[CH2:18][CH2:19][CH2:20][CH2:21][O:22]4)[CH2:23][CH2:24]3)[cH:25][cH:26]2)[O:27][C:28]1([CH3:29])[CH3:30]\"}",
"molecule": {
"id": "d42lght1fv4jer8zh42epy4b",
"inchikey": "SMFTYTRLFIZIPU-NGZATLCBSA-N",
"smiles": "CC1(C)OB(c2ccc(OC[C@H]3CC[C@H](OC4CCCCO4)CC3)cc2)OC1(C)C"
},
"children": [
{
"id": "cmisc080e01rk5iddrn1fbxzy",
"routeId": "cmisc080c01rf5idd7txiimnr",
"moleculeId": "pq07mk8wrc3gcffzye9xvhzb",
"parentId": "cmisc080e01ri5iddlq98t84t",
"isLeaf": true,
"reactionHash": null,
"template": null,
"metadata": null,
"molecule": {
"id": "pq07mk8wrc3gcffzye9xvhzb",
"inchikey": "BICZJRAGTCRORZ-UHFFFAOYSA-N",
"smiles": "CC1(C)OB(c2ccc(O)cc2)OC1(C)C"
},
"children": []
},
{
"id": "cmisc080e01rl5idd8xpvaf6f",
"routeId": "cmisc080c01rf5idd7txiimnr",
"moleculeId": "ux9uoqluovbh1lmwhoh9gdc6",
"parentId": "cmisc080e01ri5iddlq98t84t",
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"metadata": null,
"molecule": {
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"inchikey": "KFVPDYTZZTZGFJ-FQVSMOOPSA-N",
"smiles": "OC[C@H]1CC[C@H](OC2CCCCO2)CC1"
},
"children": []
}
]
},
{
"id": "cmisc080e01rj5iddyxbjiyun",
"routeId": "cmisc080c01rf5idd7txiimnr",
"moleculeId": "atcn5anjhwsn8rg9ynpigl6w",
"parentId": "cmisc080d01rh5iddvljcqvld",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20120232083A1;0208;1269883\",\"rsmi\":\"Br[CH2:9][CH2:8][C@@:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])([CH3:7])[S:19]([CH3:20])(=[O:21])=[O:22].[nH:10]1[cH:11][c:12]([F:13])[c:14]([I:15])[cH:16][c:17]1=[O:18]>C1CCOC1.O=C(O)O.[Cs+].[Cs+]>[CH3:1][CH2:2][O:3][C:4](=[O:5])[C@@:6]([CH3:7])([CH2:8][CH2:9][n:10]1[cH:11][c:12]([F:13])[c:14]([I:15])[cH:16][c:17]1=[O:18])[S:19]([CH3:20])(=[O:21])=[O:22]\"}",
"molecule": {
"id": "atcn5anjhwsn8rg9ynpigl6w",
"inchikey": "WFCTXFNOSNPPJX-CYBMUJFWSA-N",
"smiles": "CCOC(=O)[C@@](C)(CCn1cc(F)c(I)cc1=O)S(C)(=O)=O"
},
"children": [
{
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"molecule": {
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"smiles": "CCOC(=O)[C@@](C)(CCBr)S(C)(=O)=O"
},
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},
{
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"parentId": "cmisc080e01rj5iddyxbjiyun",
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"reactionHash": null,
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"metadata": "{\"ID\":\"US20120232083A1;0207;1269882\",\"rsmi\":\"F[c:2]1[cH:3][c:4]([I:5])[c:6]([F:7])[cH:8][n:9]1.[OH2:1]>C1COCCO1.Cl>[O:1]=[c:2]1[cH:3][c:4]([I:5])[c:6]([F:7])[cH:8][nH:9]1\"}",
"molecule": {
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"smiles": "Oc1cc(I)c(F)cn1"
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{
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{
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]
}
]
}
}