Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
O=C(Nc1ccc(-c2ccc(C(F)(F)F)cc2Cl)nn1)c1ccc(Oc2cc3c(cc2Cl)C(C(=O)O)CCO3)cc1
InChiKey
NPQGSVSVVBMWIH-UHFFFAOYSA-N
Route Content Hash
4117506332fb1c57f69bbefb7aa01bb916a9aacdcdf80d93124088af54f54bac
Route Signature
52a3f2d3fb877016901344f6d2e5135ed5996ee5d14a61e48d9c55b937fd4b68
Synthesis route with 6 steps
Scroll to zoom. Drag to pan. Nodes marked in green are in stock.
Route tree structure (JSON format)
{
"route": {
"id": "cmisc0aqz03877qddggya72sn",
"signature": "52a3f2d3fb877016901344f6d2e5135ed5996ee5d14a61e48d9c55b937fd4b68",
"contentHash": "4117506332fb1c57f69bbefb7aa01bb916a9aacdcdf80d93124088af54f54bac",
"length": 6,
"isConvergent": false
},
"target": {
"id": "cmisc0aqz03867qddb154pv66",
"benchmarkSetId": "cmisc09u000007qddhq6eczgb",
"targetId": "n5-03789",
"moleculeId": "uuzkbipei1lw88cxyse3xmv4",
"routeLength": 6,
"isConvergent": false,
"metadata": "{}",
"molecule": {
"id": "uuzkbipei1lw88cxyse3xmv4",
"inchikey": "NPQGSVSVVBMWIH-UHFFFAOYSA-N",
"smiles": "O=C(Nc1ccc(-c2ccc(C(F)(F)F)cc2Cl)nn1)c1ccc(Oc2cc3c(cc2Cl)C(C(=O)O)CCO3)cc1"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 1
},
"rootNode": {
"id": "cmisc0ar003887qddqjrthkjt",
"routeId": "cmisc0aqz03877qddggya72sn",
"moleculeId": "uuzkbipei1lw88cxyse3xmv4",
"parentId": null,
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US08785445B2;0692;1486739\",\"rsmi\":\"CC[O:39][C:37]([CH:36]1[c:30]2[cH:29][c:27]([Cl:28])[c:26]([O:25][c:24]3[cH:23][cH:22][c:21]([C:2](=[O:1])[NH:3][c:4]4[cH:5][cH:6][c:7](-[c:8]5[c:9]([Cl:10])[cH:11][c:12]([C:13]([F:14])([F:15])[F:16])[cH:17][cH:18]5)[n:19][n:20]4)[cH:41][cH:40]3)[cH:32][c:31]2[O:33][CH2:34][CH2:35]1)=[O:38]>C1CCOC1.CCO.[Na+].O>[O:1]=[C:2]([NH:3][c:4]1[cH:5][cH:6][c:7](-[c:8]2[c:9]([Cl:10])[cH:11][c:12]([C:13]([F:14])([F:15])[F:16])[cH:17][cH:18]2)[n:19][n:20]1)[c:21]1[cH:22][cH:23][c:24]([O:25][c:26]2[c:27]([Cl:28])[cH:29][c:30]3[c:31]([cH:32]2)[O:33][CH2:34][CH2:35][CH:36]3[C:37](=[O:38])[OH:39])[cH:40][cH:41]1\"}",
"molecule": {
"id": "uuzkbipei1lw88cxyse3xmv4",
"inchikey": "NPQGSVSVVBMWIH-UHFFFAOYSA-N",
"smiles": "O=C(Nc1ccc(-c2ccc(C(F)(F)F)cc2Cl)nn1)c1ccc(Oc2cc3c(cc2Cl)C(C(=O)O)CCO3)cc1"
},
"children": [
{
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"moleculeId": "awtbxr8v26b9ys70o5ywy4v9",
"parentId": "cmisc0ar003887qddqjrthkjt",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US08785445B2;0691;1486738\",\"rsmi\":\"Cl[c:24]1[cH:23][cH:22][c:21]([NH:20][C:18]([c:17]2[cH:16][cH:15][c:14]([O:13][c:12]3[cH:11][c:10]4[c:43]([cH:42][c:40]3[Cl:41])[CH:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])[CH2:7][CH2:8][O:9]4)[cH:39][cH:38]2)=[O:19])[n:37][n:36]1.OB(O)[c:25]1[c:26]([Cl:27])[cH:28][c:29]([C:30]([F:31])([F:32])[F:33])[cH:34][cH:35]1>Cc1ccccc1.O=C(O)O.[Na+].[Na+].c1ccc([PH](c2ccccc2)(c2ccccc2)[Pd]([PH](c2ccccc2)(c2ccccc2)c2ccccc2)([PH](c2ccccc2)(c2ccccc2)c2ccccc2)[PH](c2ccccc2)(c2ccccc2)c2ccccc2)cc1>[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([O:13][c:14]3[cH:15][cH:16][c:17]([C:18](=[O:19])[NH:20][c:21]4[cH:22][cH:23][c:24](-[c:25]5[c:26]([Cl:27])[cH:28][c:29]([C:30]([F:31])([F:32])[F:33])[cH:34][cH:35]5)[n:36][n:37]4)[cH:38][cH:39]3)[c:40]([Cl:41])[cH:42][c:43]21\"}",
"molecule": {
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"inchikey": "PNMRPHWIGZWCDG-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C1CCOc2cc(Oc3ccc(C(=O)Nc4ccc(-c5ccc(C(F)(F)F)cc5Cl)nn4)cc3)c(Cl)cc21"
},
"children": [
{
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"parentId": "cmisc0ar003897qdd3momq9wo",
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"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US08785445B2;0690;1486737\",\"rsmi\":\"O[C:18]([c:17]1[cH:16][cH:15][c:14]([O:13][c:12]2[cH:11][c:10]3[c:33]([cH:32][c:30]2[Cl:31])[CH:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])[CH2:7][CH2:8][O:9]3)[cH:29][cH:28]1)=[O:19].[NH2:20][c:21]1[cH:22][cH:23][c:24]([Cl:25])[n:26][n:27]1>CCOC(C)=O.CN(C)C=O.ClCCCl.O=C(Cl)C(=O)Cl.c1ccncc1>[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([O:13][c:14]3[cH:15][cH:16][c:17]([C:18](=[O:19])[NH:20][c:21]4[cH:22][cH:23][c:24]([Cl:25])[n:26][n:27]4)[cH:28][cH:29]3)[c:30]([Cl:31])[cH:32][c:33]21\"}",
"molecule": {
"id": "svbehnkip6182kkeighul8k8",
"inchikey": "BOVHUGQZPMBJPL-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C1CCOc2cc(Oc3ccc(C(=O)Nc4ccc(Cl)nn4)cc3)c(Cl)cc21"
},
"children": [
{
"id": "cmisc0ar0038c7qddzndiaeyg",
"routeId": "cmisc0aqz03877qddggya72sn",
"moleculeId": "gdhv1jbfouq3kwvssjmff8c8",
"parentId": "cmisc0ar0038a7qddgstuyrpe",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US08785445B2;0521;1486677\",\"rsmi\":\"CC(C)(C)[O:20][C:18]([c:17]1[cH:16][cH:15][c:14]([O:13][c:12]2[cH:11][c:10]3[c:26]([cH:25][c:23]2[Cl:24])[CH:6]([C:4]([O:3][CH2:2][CH3:1])=[O:5])[CH2:7][CH2:8][O:9]3)[cH:22][cH:21]1)=[O:19]>CCOC(C)=O.Cl>[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([O:13][c:14]3[cH:15][cH:16][c:17]([C:18](=[O:19])[OH:20])[cH:21][cH:22]3)[c:23]([Cl:24])[cH:25][c:26]21\"}",
"molecule": {
"id": "gdhv1jbfouq3kwvssjmff8c8",
"inchikey": "WREVNSQSYUJJKJ-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C1CCOc2cc(Oc3ccc(C(=O)O)cc3)c(Cl)cc21"
},
"children": [
{
"id": "cmisc0ar0038e7qddxgexu9po",
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"parentId": "cmisc0ar0038c7qddzndiaeyg",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US08785445B2;0520;1486676\",\"rsmi\":\"Br[c:14]1[cH:15][cH:16][c:17]([C:18](=[O:19])[O:20][C:21]([CH3:22])([CH3:23])[CH3:24])[cH:25][cH:26]1.[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([OH:13])[c:27]([Cl:28])[cH:29][c:30]21>C.C1COCCO1.CCOC(C)=O.CN(C)CC(=O)O.Cl.O=C(O)O.[Cs+].[Cs+]>[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([O:13][c:14]3[cH:15][cH:16][c:17]([C:18](=[O:19])[O:20][C:21]([CH3:22])([CH3:23])[CH3:24])[cH:25][cH:26]3)[c:27]([Cl:28])[cH:29][c:30]21\"}",
"molecule": {
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"inchikey": "LKHBRRLGUNKYKV-UHFFFAOYSA-N",
"smiles": "CCOC(=O)C1CCOc2cc(Oc3ccc(C(=O)OC(C)(C)C)cc3)c(Cl)cc21"
},
"children": [
{
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"isLeaf": true,
"reactionHash": null,
"template": null,
"metadata": null,
"molecule": {
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"smiles": "CC(C)(C)OC(=O)c1ccc(Br)cc1"
},
"children": []
},
{
"id": "cmisc0ar0038g7qddt29fhj4w",
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"template": null,
"metadata": "{\"ID\":\"US08785445B2;0519;1486675\",\"rsmi\":\"O[C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([OH:13])[c:14]([Cl:15])[cH:16][c:17]21.[CH3:1][CH2:2][OH:3]>CCOC(C)=O.O=S(=O)(O)O>[CH3:1][CH2:2][O:3][C:4](=[O:5])[CH:6]1[CH2:7][CH2:8][O:9][c:10]2[cH:11][c:12]([OH:13])[c:14]([Cl:15])[cH:16][c:17]21\"}",
"molecule": {
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},
"children": [
{
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{
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}
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}
]
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},
{
"id": "cmisc0ar0038d7qdd1f2n615h",
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"metadata": null,
"molecule": {
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"smiles": "N=c1ccc(Cl)n[nH]1"
},
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}
]
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{
"id": "cmisc0ar0038b7qddqtci025w",
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"molecule": {
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"inchikey": "JKSUCAFAUNSPLO-UHFFFAOYSA-N",
"smiles": "OB(O)c1ccc(C(F)(F)F)cc1Cl"
},
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}
]
}
]
}
}