Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
Cc1c(-c2ccc(OCCCl)cc2)ccc2c1ncn2C(c1ccccc1)(c1ccccc1)c1ccccc1
InChiKey
QOBQOGKSFDONBC-UHFFFAOYSA-N
Route Content Hash
1c85faf3499654c3174c6105cc5cecc5f20604c5f5c8ab877209cbf05cba6972
Route Signature
d3ff2cadd99554b9b4abbfe8b1a048368fbdec7bcf7cf6e6956decb2585946b7
Synthesis route with 6 steps
Scroll to zoom. Drag to pan. Nodes marked in green are in stock.
Route tree structure (JSON format)
{
"route": {
"id": "cmisc00hj036x19dd64kxig62",
"signature": "d3ff2cadd99554b9b4abbfe8b1a048368fbdec7bcf7cf6e6956decb2585946b7",
"contentHash": "1c85faf3499654c3174c6105cc5cecc5f20604c5f5c8ab877209cbf05cba6972",
"length": 6,
"isConvergent": false
},
"target": {
"id": "cmisc0d7a0238a8ddpijrgclg",
"benchmarkSetId": "cmisc0cnd0000a8dd4g4pdf0s",
"targetId": "n5-00293",
"moleculeId": "izongt6gocdwedauf3pendbj",
"routeLength": 6,
"isConvergent": false,
"metadata": "{}",
"molecule": {
"id": "izongt6gocdwedauf3pendbj",
"inchikey": "QOBQOGKSFDONBC-UHFFFAOYSA-N",
"smiles": "Cc1c(-c2ccc(OCCCl)cc2)ccc2c1ncn2C(c1ccccc1)(c1ccccc1)c1ccccc1"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 4
},
"rootNode": {
"id": "cmisc00hj036y19ddg82ep8pt",
"routeId": "cmisc00hj036x19dd64kxig62",
"moleculeId": "izongt6gocdwedauf3pendbj",
"parentId": null,
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0251;937370\",\"rsmi\":\"Cc1ccc(S(=O)(=O)O[CH2:9][CH2:10][Cl:11])cc1.[CH3:1][c:2]1[c:3](-[c:4]2[cH:5][cH:6][c:7]([OH:8])[cH:12][cH:13]2)[cH:14][cH:15][c:16]2[c:17]1[n:18][cH:19][n:20]2[C:21]([c:22]1[cH:23][cH:24][cH:25][cH:26][cH:27]1)([c:28]1[cH:29][cH:30][cH:31][cH:32][cH:33]1)[c:34]1[cH:35][cH:36][cH:37][cH:38][cH:39]1>CC#N.O=C(O)O.[K+].[K+]>[CH3:1][c:2]1[c:3](-[c:4]2[cH:5][cH:6][c:7]([O:8][CH2:9][CH2:10][Cl:11])[cH:12][cH:13]2)[cH:14][cH:15][c:16]2[c:17]1[n:18][cH:19][n:20]2[C:21]([c:22]1[cH:23][cH:24][cH:25][cH:26][cH:27]1)([c:28]1[cH:29][cH:30][cH:31][cH:32][cH:33]1)[c:34]1[cH:35][cH:36][cH:37][cH:38][cH:39]1\"}",
"molecule": {
"id": "izongt6gocdwedauf3pendbj",
"inchikey": "QOBQOGKSFDONBC-UHFFFAOYSA-N",
"smiles": "Cc1c(-c2ccc(OCCCl)cc2)ccc2c1ncn2C(c1ccccc1)(c1ccccc1)c1ccccc1"
},
"children": [
{
"id": "cmisc00hk036z19dd33b4mekp",
"routeId": "cmisc00hj036x19dd64kxig62",
"moleculeId": "v9itkgv3u5k8s8j6tnws600e",
"parentId": "cmisc00hj036y19ddg82ep8pt",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0248;937369\",\"rsmi\":\"Br[c:3]1[c:2]([CH3:1])[c:14]2[c:13]([cH:12][cH:11]1)[n:17]([C:18]([c:19]1[cH:20][cH:21][cH:22][cH:23][cH:24]1)([c:25]1[cH:26][cH:27][cH:28][cH:29][cH:30]1)[c:31]1[cH:32][cH:33][cH:34][cH:35][cH:36]1)[cH:16][n:15]2.OB(O)[c:4]1[cH:5][cH:6][c:7]([OH:8])[cH:9][cH:10]1>COCCOC.O=C(O)O.[Na+].[Na+].c1ccc([PH](c2ccccc2)(c2ccccc2)[Pd]([PH](c2ccccc2)(c2ccccc2)c2ccccc2)([PH](c2ccccc2)(c2ccccc2)c2ccccc2)[PH](c2ccccc2)(c2ccccc2)c2ccccc2)cc1>[CH3:1][c:2]1[c:3](-[c:4]2[cH:5][cH:6][c:7]([OH:8])[cH:9][cH:10]2)[cH:11][cH:12][c:13]2[c:14]1[n:15][cH:16][n:17]2[C:18]([c:19]1[cH:20][cH:21][cH:22][cH:23][cH:24]1)([c:25]1[cH:26][cH:27][cH:28][cH:29][cH:30]1)[c:31]1[cH:32][cH:33][cH:34][cH:35][cH:36]1\"}",
"molecule": {
"id": "v9itkgv3u5k8s8j6tnws600e",
"inchikey": "WNZBMPRSKRKZQF-UHFFFAOYSA-N",
"smiles": "Cc1c(-c2ccc(O)cc2)ccc2c1ncn2C(c1ccccc1)(c1ccccc1)c1ccccc1"
},
"children": [
{
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"moleculeId": "yntzsucifdwmiud1tbwlo3dr",
"parentId": "cmisc00hk036z19dd33b4mekp",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0264;937374\",\"rsmi\":\"Cl[C:12]([c:13]1[cH:14][cH:15][cH:16][cH:17][cH:18]1)([c:19]1[cH:20][cH:21][cH:22][cH:23][cH:24]1)[c:25]1[cH:26][cH:27][cH:28][cH:29][cH:30]1.[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][c:7]2[c:8]1[n:9][cH:10][nH:11]2>C1CCOC1.CCCC[N+](CCCC)(CCCC)CCCC.[HH].I.[Na+]>[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][c:7]2[c:8]1[n:9][cH:10][n:11]2[C:12]([c:13]1[cH:14][cH:15][cH:16][cH:17][cH:18]1)([c:19]1[cH:20][cH:21][cH:22][cH:23][cH:24]1)[c:25]1[cH:26][cH:27][cH:28][cH:29][cH:30]1\"}",
"molecule": {
"id": "yntzsucifdwmiud1tbwlo3dr",
"inchikey": "DTWPIOAUEMRNHD-UHFFFAOYSA-N",
"smiles": "Cc1c(Br)ccc2c1ncn2C(c1ccccc1)(c1ccccc1)c1ccccc1"
},
"children": [
{
"id": "cmisc00hk037319dd9jptjwd8",
"routeId": "cmisc00hj036x19dd64kxig62",
"moleculeId": "z2fsvcc89pnphf7q60lkq47y",
"parentId": "cmisc00hk037119ddpa6hygk8",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0261;937373\",\"rsmi\":\"O=[CH:10]O.[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][c:7]([NH2:11])[c:8]1[NH2:9]>Cl.N>[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][c:7]2[c:8]1[n:9][cH:10][nH:11]2\"}",
"molecule": {
"id": "z2fsvcc89pnphf7q60lkq47y",
"inchikey": "JNXOUOKRAGYUNE-UHFFFAOYSA-N",
"smiles": "Cc1c(Br)ccc2[nH]cnc12"
},
"children": [
{
"id": "cmisc00hk037519ddnn3cljy9",
"routeId": "cmisc00hj036x19dd64kxig62",
"moleculeId": "c845tlbkwbuha69ml2qfgf8d",
"parentId": "cmisc00hk037319dd9jptjwd8",
"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0258;937372\",\"rsmi\":\"O=[N+:4]([O-])[c:3]1[c:2]([CH3:1])[c:9]([Br:10])[cH:8][cH:7][c:5]1[N+:6](=O)[O-]>CCO.CCOC(C)=O.Cl[Sn]Cl.O.O=C(O)O.[Na+]>[CH3:1][c:2]1[c:3]([NH2:4])[c:5]([NH2:6])[cH:7][cH:8][c:9]1[Br:10]\"}",
"molecule": {
"id": "c845tlbkwbuha69ml2qfgf8d",
"inchikey": "JBZQNBSYFRCDRA-UHFFFAOYSA-N",
"smiles": "Cc1c(Br)ccc(N)c1N"
},
"children": [
{
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"isLeaf": false,
"reactionHash": null,
"template": null,
"metadata": "{\"ID\":\"US20100222345A1;0255;937371\",\"rsmi\":\"O[N+:8](=[O:9])[O-:10].[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][cH:7][c:11]1[N+:12](=[O:13])[O-:14]>NC(N)=O.O=S(=O)(O)O>[CH3:1][c:2]1[c:3]([Br:4])[cH:5][cH:6][c:7]([N+:8](=[O:9])[O-:10])[c:11]1[N+:12](=[O:13])[O-:14]\"}",
"molecule": {
"id": "lxdsjv4cb9aoxdw17n7sg88p",
"inchikey": "OXYXHHOXCIPFBY-UHFFFAOYSA-N",
"smiles": "Cc1c(Br)ccc([N+](=O)[O-])c1[N+](=O)[O-]"
},
"children": [
{
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"parentId": "cmisc00hk037719dddnbta3q2",
"isLeaf": true,
"reactionHash": null,
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"molecule": {
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"inchikey": "LYTNSGFSAXWBCA-UHFFFAOYSA-N",
"smiles": "Cc1c(Br)cccc1[N+](=O)[O-]"
},
"children": []
},
{
"id": "cmisc00hl037919dd8ubaq905",
"routeId": "cmisc00hj036x19dd64kxig62",
"moleculeId": "bcsdom55ez96hdb4wx880j7s",
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"reactionHash": null,
"template": null,
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"molecule": {
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"smiles": "O=[N+]([O-])O"
},
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}
]
}
]
},
{
"id": "cmisc00hk037619ddrpo4diqa",
"routeId": "cmisc00hj036x19dd64kxig62",
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"molecule": {
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"smiles": "O=CO"
},
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}
]
},
{
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"molecule": {
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"smiles": "ClC(c1ccccc1)(c1ccccc1)c1ccccc1"
},
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}
]
},
{
"id": "cmisc00hk037219dduxj6al3d",
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"molecule": {
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"smiles": "OB(O)c1ccc(O)cc1"
},
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}
]
},
{
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"molecule": {
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"smiles": "Cc1ccc(S(=O)(=O)OCCCl)cc1"
},
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}
]
}
}