Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
Nc1ncc(Oc2ccccc2)nc1N1CCOCC1
InChiKey
XNCCHYUSDMOHLT-UHFFFAOYSA-N
Route Signature
94ae6d56d11d423d2a92956cbebdf059e2723b2aebd95ae1e418f65e9c903d8f
Synthesis route with 2 steps
Route tree structure (JSON format)
{
"route": {
"id": "sa_9e9c92705dba3e6231f80d87",
"signature": "94ae6d56d11d423d2a92956cbebdf059e2723b2aebd95ae1e418f65e9c903d8f",
"contentHash": "9613824922e4d50e4fd1556b3d27dbe4b581fd018663e69b42f10b7a57e4b4f9",
"length": 2,
"isConvergent": false
},
"target": {
"id": "sa_d2a4e8dfed3c9b40f5061650",
"benchmarkSetId": "f925e688d731a0ad4e3aa6a505df094f6d3ca64ce3facc312bc5f64731921b33",
"targetId": "n5-09162",
"moleculeId": "sa_c4b5f5e531e13e71b4b90524",
"smiles": "Nc1ncc(Oc2ccccc2)nc1N1CCOCC1",
"routeLength": 2,
"isConvergent": false,
"metadata": null,
"molecule": {
"id": "sa_c4b5f5e531e13e71b4b90524",
"inchikey": "XNCCHYUSDMOHLT-UHFFFAOYSA-N",
"smiles": "Nc1ncc(Oc2ccccc2)nc1N1CCOCC1"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 2
},
"rootNode": {
"id": "8851",
"routeId": "sa_9e9c92705dba3e6231f80d87",
"moleculeId": "sa_c4b5f5e531e13e71b4b90524",
"parentId": null,
"isLeaf": false,
"molecule": {
"id": "sa_c4b5f5e531e13e71b4b90524",
"inchikey": "XNCCHYUSDMOHLT-UHFFFAOYSA-N",
"smiles": "Nc1ncc(Oc2ccccc2)nc1N1CCOCC1"
},
"smiles": "Nc1ncc(Oc2ccccc2)nc1N1CCOCC1",
"reactionStepId": "sa_f8f09b36d446455b121c6ae1",
"template": null,
"metadata": "{\"annotations\":{\"ID\":\"US04343802;;98482\",\"rsmi\":\"Br[c:5]1[cH:4][n:3][c:2]([NH2:1])[c:14]([N:15]2[CH2:16][CH2:17][O:18][CH2:19][CH2:20]2)[n:13]1.[OH:6][c:7]1[cH:8][cH:9][cH:10][cH:11][cH:12]1>[Na+]>[NH2:1][c:2]1[n:3][cH:4][c:5]([O:6][c:7]2[cH:8][cH:9][cH:10][cH:11][cH:12]2)[n:13][c:14]1[N:15]1[CH2:16][CH2:17][O:18][CH2:19][CH2:20]1\"},\"mapped_reaction_smiles\":\"Br[c:5]1[cH:4][n:3][c:2]([NH2:1])[c:14]([N:15]2[CH2:16][CH2:17][O:18][CH2:19][CH2:20]2)[n:13]1.[OH:6][c:7]1[cH:8][cH:9][cH:10][cH:11][cH:12]1>[Na+]>[NH2:1][c:2]1[n:3][cH:4][c:5]([O:6][c:7]2[cH:8][cH:9][cH:10][cH:11][cH:12]2)[n:13][c:14]1[N:15]1[CH2:16][CH2:17][O:18][CH2:19][CH2:20]1\"}",
"reactionStep": {
"id": "sa_f8f09b36d446455b121c6ae1",
"reactionHash": "622d96e5872f0d52792944cfa3360c882ff05a07142fa4c6b1fc70d52637e32e"
},
"children": [
{
"id": "8852",
"routeId": "sa_9e9c92705dba3e6231f80d87",
"moleculeId": "sa_1e87f30c7783ddb7102e9ace",
"parentId": "8851",
"isLeaf": false,
"molecule": {
"id": "sa_1e87f30c7783ddb7102e9ace",
"inchikey": "CWVGSOUZYXNHLF-UHFFFAOYSA-N",
"smiles": "Nc1ncc(Br)nc1N1CCOCC1"
},
"smiles": "Nc1ncc(Br)nc1N1CCOCC1",
"reactionStepId": "sa_3dfd728abd749d86449ffda0",
"template": null,
"metadata": "{\"annotations\":{\"ID\":\"US04343802;;98476\",\"rsmi\":\"Br[c:8]1[c:2]([NH2:1])[n:3][cH:4][c:5]([Br:6])[n:7]1.[NH:9]1[CH2:10][CH2:11][O:12][CH2:13][CH2:14]1>>[NH2:1][c:2]1[n:3][cH:4][c:5]([Br:6])[n:7][c:8]1[N:9]1[CH2:10][CH2:11][O:12][CH2:13][CH2:14]1\"},\"mapped_reaction_smiles\":\"Br[c:8]1[c:2]([NH2:1])[n:3][cH:4][c:5]([Br:6])[n:7]1.[NH:9]1[CH2:10][CH2:11][O:12][CH2:13][CH2:14]1>>[NH2:1][c:2]1[n:3][cH:4][c:5]([Br:6])[n:7][c:8]1[N:9]1[CH2:10][CH2:11][O:12][CH2:13][CH2:14]1\"}",
"reactionStep": {
"id": "sa_3dfd728abd749d86449ffda0",
"reactionHash": "c1a2c52dba89ddeaf979074f63d0e878562b8b853eb787d2956cc593c0f6c31e"
},
"children": [
{
"id": "8853",
"routeId": "sa_9e9c92705dba3e6231f80d87",
"moleculeId": "sa_819078c083c500edd7ce53a4",
"parentId": "8852",
"isLeaf": true,
"molecule": {
"id": "sa_819078c083c500edd7ce53a4",
"inchikey": "DTLBKXRFWUERQN-UHFFFAOYSA-N",
"smiles": "Nc1ncc(Br)nc1Br"
},
"smiles": "Nc1ncc(Br)nc1Br",
"reactionStepId": null,
"template": null,
"metadata": null,
"reactionStep": null,
"children": []
},
{
"id": "8854",
"routeId": "sa_9e9c92705dba3e6231f80d87",
"moleculeId": "sa_39d71c291f7fdf13918cc969",
"parentId": "8852",
"isLeaf": true,
"molecule": {
"id": "sa_39d71c291f7fdf13918cc969",
"inchikey": "YNAVUWVOSKDBBP-UHFFFAOYSA-N",
"smiles": "C1COCCN1"
},
"smiles": "C1COCCN1",
"reactionStepId": null,
"template": null,
"metadata": null,
"reactionStep": null,
"children": []
}
]
},
{
"id": "8855",
"routeId": "sa_9e9c92705dba3e6231f80d87",
"moleculeId": "sa_2a52b4c246b479e8e6f1627e",
"parentId": "8851",
"isLeaf": true,
"molecule": {
"id": "sa_2a52b4c246b479e8e6f1627e",
"inchikey": "ISWSIDIOOBJBQZ-UHFFFAOYSA-N",
"smiles": "Oc1ccccc1"
},
"smiles": "Oc1ccccc1",
"reactionStepId": null,
"template": null,
"metadata": null,
"reactionStep": null,
"children": []
}
]
}
}