Benchmark Sets
Browse retrosynthesis benchmark datasets with ground truth routes
| Name | Description | Targets | Stock |
|---|---|---|---|
SMILES
O=Cc1cnc(OCC(F)(F)F)cn1
InChiKey
PAJGZWMIHQOHML-UHFFFAOYSA-N
Route Signature
a4152a0279c5975d8b6bbbd0dd3b551b683297747bfc2d45acd20255b68157ad
Synthesis route with 3 steps
Route tree structure (JSON format)
{
"route": {
"id": "sa_cf544ecbc4ef56e63902eba1",
"signature": "a4152a0279c5975d8b6bbbd0dd3b551b683297747bfc2d45acd20255b68157ad",
"contentHash": "a20aa3ef463d251e53f79272a9fd0a4c34bd290236a1d7842beb130815fb6afc",
"length": 3,
"isConvergent": false
},
"target": {
"id": "sa_f6bb2cad20e51f8a8e87ea5a",
"benchmarkSetId": "f925e688d731a0ad4e3aa6a505df094f6d3ca64ce3facc312bc5f64731921b33",
"targetId": "n5-04019",
"moleculeId": "sa_092b2d4252321d7b7774e577",
"smiles": "O=Cc1cnc(OCC(F)(F)F)cn1",
"routeLength": 3,
"isConvergent": false,
"metadata": null,
"molecule": {
"id": "sa_092b2d4252321d7b7774e577",
"inchikey": "PAJGZWMIHQOHML-UHFFFAOYSA-N",
"smiles": "O=Cc1cnc(OCC(F)(F)F)cn1"
},
"hasAcceptableRoutes": true,
"acceptableRoutesCount": 3
},
"rootNode": {
"id": "7139",
"routeId": "sa_cf544ecbc4ef56e63902eba1",
"moleculeId": "sa_092b2d4252321d7b7774e577",
"parentId": null,
"isLeaf": false,
"molecule": {
"id": "sa_092b2d4252321d7b7774e577",
"inchikey": "PAJGZWMIHQOHML-UHFFFAOYSA-N",
"smiles": "O=Cc1cnc(OCC(F)(F)F)cn1"
},
"smiles": "O=Cc1cnc(OCC(F)(F)F)cn1",
"reactionStepId": "sa_b04f3eddadc0ad41183640d7",
"template": null,
"metadata": "{\"annotations\":{\"ID\":\"US20100216816A1;0484;933675\",\"rsmi\":\"Cl[c:6]1[cH:5][n:4][c:3]([CH:2]=[O:1])[cH:14][n:13]1.[OH:7][CH2:8][C:9]([F:10])([F:11])[F:12]>Cl.[Na]>[O:1]=[CH:2][c:3]1[n:4][cH:5][c:6]([O:7][CH2:8][C:9]([F:10])([F:11])[F:12])[n:13][cH:14]1\"},\"mapped_reaction_smiles\":\"Cl[c:6]1[cH:5][n:4][c:3]([CH:2]=[O:1])[cH:14][n:13]1.[OH:7][CH2:8][C:9]([F:10])([F:11])[F:12]>Cl.[Na]>[O:1]=[CH:2][c:3]1[n:4][cH:5][c:6]([O:7][CH2:8][C:9]([F:10])([F:11])[F:12])[n:13][cH:14]1\"}",
"reactionStep": {
"id": "sa_b04f3eddadc0ad41183640d7",
"reactionHash": "146de536fe2cfd7c4e35c5bd1f35f477016b9f4704056693516ff7c237d2c7de"
},
"children": [
{
"id": "7140",
"routeId": "sa_cf544ecbc4ef56e63902eba1",
"moleculeId": "sa_5f31e0fa48946ffcfc9b5d06",
"parentId": "7139",
"isLeaf": true,
"molecule": {
"id": "sa_5f31e0fa48946ffcfc9b5d06",
"inchikey": "RHQDFWAXVIIEBN-UHFFFAOYSA-N",
"smiles": "OCC(F)(F)F"
},
"smiles": "OCC(F)(F)F",
"reactionStepId": null,
"template": null,
"metadata": null,
"reactionStep": null,
"children": []
},
{
"id": "7141",
"routeId": "sa_cf544ecbc4ef56e63902eba1",
"moleculeId": "sa_9800185ddb2f67661ad1c8f0",
"parentId": "7139",
"isLeaf": false,
"molecule": {
"id": "sa_9800185ddb2f67661ad1c8f0",
"inchikey": "UIKDIRUDGAKSGG-UHFFFAOYSA-N",
"smiles": "O=Cc1cnc(Cl)cn1"
},
"smiles": "O=Cc1cnc(Cl)cn1",
"reactionStepId": "sa_d4e13f965188cbc1f6fd1ad0",
"template": null,
"metadata": "{\"annotations\":{\"ID\":\"US20100216816A1;0483;933674\",\"rsmi\":\"[OH:1][CH2:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1>ClC(Cl)Cl.O=[Mn]=O>[O:1]=[CH:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1\"},\"mapped_reaction_smiles\":\"[OH:1][CH2:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1>ClC(Cl)Cl.O=[Mn]=O>[O:1]=[CH:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1\"}",
"reactionStep": {
"id": "sa_d4e13f965188cbc1f6fd1ad0",
"reactionHash": "8f2b5b8174429d71c11dda47e720e6d240863ef377cf14ee6ef6c5bcaf92fd4c"
},
"children": [
{
"id": "7142",
"routeId": "sa_cf544ecbc4ef56e63902eba1",
"moleculeId": "sa_fbf85895958923cbeb77b733",
"parentId": "7141",
"isLeaf": false,
"molecule": {
"id": "sa_fbf85895958923cbeb77b733",
"inchikey": "YUTQYZGRAJOIJV-UHFFFAOYSA-N",
"smiles": "OCc1cnc(Cl)cn1"
},
"smiles": "OCc1cnc(Cl)cn1",
"reactionStepId": "sa_245e8e50dde73020edd18649",
"template": null,
"metadata": "{\"annotations\":{\"ID\":\"US20100216816A1;0483;933673\",\"rsmi\":\"C[O:1][C:2](=O)[c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1>C1CCOC1.CC(C)C[AlH]CC(C)C.CCO.O=C(O)C(O)C(O)C(=O)O.[K+].[Na+]>[OH:1][CH2:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1\"},\"mapped_reaction_smiles\":\"C[O:1][C:2](=O)[c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1>C1CCOC1.CC(C)C[AlH]CC(C)C.CCO.O=C(O)C(O)C(O)C(=O)O.[K+].[Na+]>[OH:1][CH2:2][c:3]1[n:4][cH:5][c:6]([Cl:7])[n:8][cH:9]1\"}",
"reactionStep": {
"id": "sa_245e8e50dde73020edd18649",
"reactionHash": "c6f0e8f13d78d29f8bb05af9440a0b1a7e8e1c1658e36ab6a564c04fde98f2f7"
},
"children": [
{
"id": "7143",
"routeId": "sa_cf544ecbc4ef56e63902eba1",
"moleculeId": "sa_5bf777050d183b7d50c3da1c",
"parentId": "7142",
"isLeaf": true,
"molecule": {
"id": "sa_5bf777050d183b7d50c3da1c",
"inchikey": "CVVMLRFXZPKILB-UHFFFAOYSA-N",
"smiles": "COC(=O)c1cnc(Cl)cn1"
},
"smiles": "COC(=O)c1cnc(Cl)cn1",
"reactionStepId": null,
"template": null,
"metadata": null,
"reactionStep": null,
"children": []
}
]
}
]
}
]
}
}